Introduction to the Linux Command Line

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  • Instructor:  Joey Bernard
  • Level: Beginner
  • Duration: 1.5 hours
  • Helpers: Yashar Monfared
  • Date:  September 25, 2024 | 10:00 - 11:30 am (Atlantic)
  • Prerequisite: None
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COURSE DESCRIPTION

Linux is the terminal interface used to enable you to use the ACENET and the Digital Research Alliance of Canada (the Alliance) HPC clusters from your desktop. It's the tool you need to get your data on the clusters, run your programs, and get your data back. In this session, learn how to get started with Linux, how to create and navigate directories for your data, load files, manage your storage, run programs on the computing clusters, and set file permissions. This workshop is designed for those with no prior experience in working with a terminal interface.

This session will be delivered online.

To get the most from ACENET basics, please register for an Alliance account. To register contact your supervising professor, ask for their CCRI, then visit https://ccdb.alliancecan.ca/account_application. If your professor is not registered with the Alliance, please have them register, then follow up with you. In addition to an Alliance account, you will want a computer with Windows, MacOS X, or a Unix-based operating system (not a ChromeBook), and a stable internet connection. A registered account is not mandatory, just recommended to get the most out of our lessons. You can attend the first session to see how ACENET can assist in accelerating your computational research before you decide to obtain an account, if you wish.
 

SETUP REQUIREMENTS

  • You will want a computer with Windows, MacOS X, or a Unix-based operating system (not a ChromeBook), and a stable internet connection. A registered alliance account is not mandatory, just recommended to get the most out of our lessons. You can attend the first session to see how ACENET can assist in accelerating your computational research before you decide to obtain an account.
  • For Windows users, download MobaXterm.

Meet your teaching team

Joey Bernard

Instructor

Digital Research Consultant (Health Data)

BSc Physics, BCSci, Diploma in University Teaching, University of New Brunswick

ITIL Foundation Certificate

Joey has been with ACENET since 2008 as a digital research consultant, with the exception of a six-year hiatus with the University of New Brunswick (UNB). His background includes UNB's physics department where he helped develop new instrumentation to study the ionosphere, and UNB's Center for Enhanced Teaching and Learning. He is located at UNB, where he is currently developing a remote cloud data storage and access solution for the New Brunswick Institute for Research, Data & Training (NB-IRDT). Joey is a certified Software Carpentry instructor, and has written columns on scientific computing and Python programming for various computer magazines, a recipe book for the Python programming language, and has reviewed articles for the Journal of Open Source Software. He is currently working on his PhD in Physics. 

Tannia Chevez

Helper

Digital Training Specialist
BSc Computational Chemistry, Memorial University

Tannia joined ACENET in 2023 and is based in St. John’s. She has held positions as a research assistant in various departments, with responsibilities ranging from developing algorithms for an online animal sound repository, to crafting chemical composite films. Proficient in Python, Java, and JavaScript, she has focused on spectral data analysis, SEM image-based nanoparticle detection, and software development for data analysis. Tannia contributed significantly to the publication of a research paper by analyzing potential environmental toxicants, generating millions of chemical structure IDs, and conducting data extraction and analysis using Python, R, and JavaScript, as well as enhancing algorithms for simulating potential environmental toxicants’ behavior in water, soil, and air environments. Tannia’s teaching experience includes a Leader Instructor at Brilliant Labs where she taught a range of digital topics, and a Digital Literacy Instructor for the Association for New Canadians.

Yashar Monfared

Helper

Research Consultant
Ph.D. Electrical and Computer Engineering, Dalhousie University

Yashar joined ACENET in 2023 and is based in Nova Scotia. With a Ph.D. from Dalhousie University in Electrical and Computer Engineering, he has extensive experience managing research projects, developing curriculum, and teaching in various disciplines. His research focused on optical systems, nanomaterials, and their applications in various fields. Yashar has secured academic grants, published over 40 research articles, and instructed courses at multiple universities.